Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.73■□□□□ 0.11
CLRN1P58418 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.73■□□□□ 0.11
CLRN1P58418 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 PCED1CP-201ENST00000419887 785 ntBASIC15.73■□□□□ 0.11
CLRN1P58418 AC096633.1-201ENST00000422446 749 ntBASIC15.73■□□□□ 0.11
CLRN1P58418 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.73■□□□□ 0.11
CLRN1P58418 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 CHCHD2P8-201ENST00000429873 447 ntBASIC15.73■□□□□ 0.11
CLRN1P58418 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 RN7SL606P-201ENST00000472779 293 ntBASIC15.73■□□□□ 0.11
CLRN1P58418 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.73■□□□□ 0.11
CLRN1P58418 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.73■□□□□ 0.11
CLRN1P58418 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.73■□□□□ 0.11
CLRN1P58418 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.73■□□□□ 0.11
CLRN1P58418 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CLRN1P58418 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.73■□□□□ 0.11
CLRN1P58418 IER3-202ENST00000376377 1350 ntBASIC15.73■□□□□ 0.11
CLRN1P58418 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLRN1P58418 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.73■□□□□ 0.11
CLRN1P58418 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CLRN1P58418 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CLRN1P58418 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 AL138688.1-201ENST00000624851 1594 ntBASIC15.72■□□□□ 0.11
CLRN1P58418 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.72■□□□□ 0.11
CLRN1P58418 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CLRN1P58418 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.72■□□□□ 0.11
CLRN1P58418 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.72■□□□□ 0.11
CLRN1P58418 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.72■□□□□ 0.11
CLRN1P58418 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLRN1P58418 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.72■□□□□ 0.11
CLRN1P58418 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.72■□□□□ 0.11
CLRN1P58418 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLRN1P58418 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CLRN1P58418 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 AC097374.2-201ENST00000618617 1306 ntBASIC15.71■□□□□ 0.11
CLRN1P58418 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CLRN1P58418 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.71■□□□□ 0.11
CLRN1P58418 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.71■□□□□ 0.11
CLRN1P58418 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CLRN1P58418 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.71■□□□□ 0.11
CLRN1P58418 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.71■□□□□ 0.11
CLRN1P58418 AC116407.4-201ENST00000623319 1061 ntBASIC15.71■□□□□ 0.11
CLRN1P58418 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLRN1P58418 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.71■□□□□ 0.11
CLRN1P58418 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms