Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH4P55283 HTR7P1-202ENST00000624664 4411 ntBASIC17.96■□□□□ 0.47
CDH4P55283 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH4P55283 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH4P55283 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH4P55283 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 MRPL3P1-201ENST00000400109 1033 ntBASIC17.96■□□□□ 0.47
CDH4P55283 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH4P55283 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH4P55283 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 AC018712.1-201ENST00000455767 687 ntBASIC17.96■□□□□ 0.47
CDH4P55283 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDH4P55283 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 SLC25A6P4-201ENST00000586535 553 ntBASIC17.96■□□□□ 0.47
CDH4P55283 MTDHP4-201ENST00000600287 670 ntBASIC17.96■□□□□ 0.47
CDH4P55283 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH4P55283 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH4P55283 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
CDH4P55283 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.96■□□□□ 0.46
CDH4P55283 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.96■□□□□ 0.46
CDH4P55283 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH4P55283 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH4P55283 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDH4P55283 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 AC018470.1-201ENST00000624790 3129 ntBASIC17.95■□□□□ 0.46
CDH4P55283 AC148477.5-201ENST00000625164 1645 ntBASIC17.95■□□□□ 0.46
CDH4P55283 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH4P55283 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH4P55283 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CDH4P55283 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH4P55283 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH4P55283 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH4P55283 AC025062.2-201ENST00000605477 670 ntBASIC17.95■□□□□ 0.46
CDH4P55283 AL773604.1-201ENST00000617417 272 ntBASIC17.95■□□□□ 0.46
CDH4P55283 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH4P55283 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH4P55283 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH4P55283 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CDH4P55283 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH4P55283 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH4P55283 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CDH4P55283 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH4P55283 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH4P55283 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDH4P55283 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH4P55283 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH4P55283 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.94■□□□□ 0.46
CDH4P55283 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH4P55283 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH4P55283 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH4P55283 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 AC004817.3-201ENST00000602957 2129 ntBASIC17.94■□□□□ 0.46
CDH4P55283 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH4P55283 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH4P55283 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms