Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.86■□□□□ 0.77
TM4SF4P48230 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF4P48230 MIR6080-201ENST00000617359 66 ntBASIC19.86■□□□□ 0.77
TM4SF4P48230 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.86■□□□□ 0.77
TM4SF4P48230 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF4P48230 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF4P48230 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
TM4SF4P48230 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.86■□□□□ 0.77
TM4SF4P48230 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TM4SF4P48230 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TM4SF4P48230 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF4P48230 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF4P48230 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TM4SF4P48230 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF4P48230 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF4P48230 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TM4SF4P48230 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.85■□□□□ 0.77
TM4SF4P48230 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.85■□□□□ 0.77
TM4SF4P48230 KRT17P7-201ENST00000451704 1104 ntBASIC19.85■□□□□ 0.77
TM4SF4P48230 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.85■□□□□ 0.77
TM4SF4P48230 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.85■□□□□ 0.77
TM4SF4P48230 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.85■□□□□ 0.77
TM4SF4P48230 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.85■□□□□ 0.77
TM4SF4P48230 AL590560.3-201ENST00000623350 461 ntBASIC19.85■□□□□ 0.77
TM4SF4P48230 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TM4SF4P48230 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.85■□□□□ 0.77
TM4SF4P48230 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TM4SF4P48230 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 GNAS-203ENST00000306120 1878 ntBASIC19.84■□□□□ 0.77
TM4SF4P48230 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 AC126763.1-201ENST00000552015 2118 ntBASIC19.84■□□□□ 0.77
TM4SF4P48230 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TM4SF4P48230 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TM4SF4P48230 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.84■□□□□ 0.77
TM4SF4P48230 HMGA1P7-201ENST00000406908 502 ntBASIC19.84■□□□□ 0.77
TM4SF4P48230 TSSK5P-201ENST00000423978 907 ntBASIC19.84■□□□□ 0.77
TM4SF4P48230 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.84■□□□□ 0.77
TM4SF4P48230 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.84■□□□□ 0.77
TM4SF4P48230 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.84■□□□□ 0.77
TM4SF4P48230 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TM4SF4P48230 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.84■□□□□ 0.77
TM4SF4P48230 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TM4SF4P48230 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF4P48230 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.83■□□□□ 0.77
TM4SF4P48230 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF4P48230 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.83■□□□□ 0.77
TM4SF4P48230 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.83■□□□□ 0.77
TM4SF4P48230 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.83■□□□□ 0.77
TM4SF4P48230 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.83■□□□□ 0.77
TM4SF4P48230 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.83■□□□□ 0.77
TM4SF4P48230 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.83■□□□□ 0.77
TM4SF4P48230 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TM4SF4P48230 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF4P48230 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF4P48230 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF4P48230 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF4P48230 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.83■□□□□ 0.76
TM4SF4P48230 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TM4SF4P48230 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
TM4SF4P48230 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF4P48230 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF4P48230 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TM4SF4P48230 AL135999.2-201ENST00000622438 1686 ntBASIC19.82■□□□□ 0.76
TM4SF4P48230 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms