Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CHRNA3P32297 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA3P32297 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.56■□□□□ 0.56
CHRNA3P32297 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHRNA3P32297 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHRNA3P32297 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHRNA3P32297 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA3P32297 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA3P32297 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.55■□□□□ 0.56
CHRNA3P32297 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 TSSC2-201ENST00000450217 709 ntBASIC18.55■□□□□ 0.56
CHRNA3P32297 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.55■□□□□ 0.56
CHRNA3P32297 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.55■□□□□ 0.56
CHRNA3P32297 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHRNA3P32297 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA3P32297 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA3P32297 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHRNA3P32297 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA3P32297 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA3P32297 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNA3P32297 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNA3P32297 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.54■□□□□ 0.56
CHRNA3P32297 AC005332.3-201ENST00000589904 676 ntBASIC18.54■□□□□ 0.56
CHRNA3P32297 NPAP1P7-201ENST00000613027 823 ntBASIC18.54■□□□□ 0.56
CHRNA3P32297 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA3P32297 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA3P32297 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA3P32297 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA3P32297 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHRNA3P32297 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CHRNA3P32297 PKD1P1-201ENST00000458669 6805 ntBASIC18.54■□□□□ 0.56
CHRNA3P32297 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHRNA3P32297 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 Z83836.1-201ENST00000624605 1642 ntBASIC18.53■□□□□ 0.56
CHRNA3P32297 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA3P32297 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 REXO1L11P-201ENST00000620964 1927 ntBASIC18.53■□□□□ 0.56
CHRNA3P32297 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA3P32297 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA3P32297 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHRNA3P32297 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHRNA3P32297 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms