Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 MYCLP1-201ENST00000372451 1075 ntBASIC17.82■□□□□ 0.44
HLA-DQB2P05538 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 MIR5100-201ENST00000579544 119 ntBASIC17.82■□□□□ 0.44
HLA-DQB2P05538 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 AC012313.10-201ENST00000623509 926 ntBASIC17.82■□□□□ 0.44
HLA-DQB2P05538 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.82■□□□□ 0.44
HLA-DQB2P05538 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DQB2P05538 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 NUS1P1-201ENST00000446295 882 ntBASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 STK25P1-201ENST00000585406 838 ntBASIC17.81■□□□□ 0.44
HLA-DQB2P05538 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AC108860.2-201ENST00000562760 2183 ntBASIC17.81■□□□□ 0.44
HLA-DQB2P05538 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AC132938.5-201ENST00000624980 1813 ntBASIC17.81■□□□□ 0.44
HLA-DQB2P05538 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DQB2P05538 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 AL591684.3-201ENST00000605187 298 ntBASIC17.8■□□□□ 0.44
HLA-DQB2P05538 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
HLA-DQB2P05538 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms