Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 AC125634.1-201ENST00000438758 1403 ntBASIC20.22■□□□□ 0.83
MYCNP04198 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
MYCNP04198 YBX2P1-201ENST00000394192 760 ntBASIC20.22■□□□□ 0.83
MYCNP04198 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC20.22■□□□□ 0.83
MYCNP04198 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 AC090568.1-201ENST00000509499 856 ntBASIC20.22■□□□□ 0.83
MYCNP04198 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.22■□□□□ 0.83
MYCNP04198 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.22■□□□□ 0.83
MYCNP04198 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.22■□□□□ 0.83
MYCNP04198 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC20.22■□□□□ 0.83
MYCNP04198 AP001160.2-201ENST00000596071 487 ntBASIC20.22■□□□□ 0.83
MYCNP04198 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
MYCNP04198 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.22■□□□□ 0.83
MYCNP04198 AC083906.6-201ENST00000641366 219 ntBASIC20.22■□□□□ 0.83
MYCNP04198 AC079781.4-201ENST00000641908 219 ntBASIC20.22■□□□□ 0.83
MYCNP04198 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 AP002414.3-201ENST00000589352 1468 ntBASIC20.22■□□□□ 0.83
MYCNP04198 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.22■□□□□ 0.83
MYCNP04198 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
MYCNP04198 SDHAP2-201ENST00000455183 2001 ntBASIC20.22■□□□□ 0.83
MYCNP04198 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 AL024508.2-201ENST00000607749 1894 ntBASIC20.22■□□□□ 0.83
MYCNP04198 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MYCNP04198 AL049812.1-201ENST00000432563 2267 ntBASIC20.22■□□□□ 0.83
MYCNP04198 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MYCNP04198 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 AC023274.1-201ENST00000418278 595 ntBASIC20.21■□□□□ 0.83
MYCNP04198 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC20.21■□□□□ 0.83
MYCNP04198 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.21■□□□□ 0.83
MYCNP04198 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.21■□□□□ 0.83
MYCNP04198 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.21■□□□□ 0.83
MYCNP04198 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 AC118465.1-201ENST00000513820 1271 ntBASIC20.21■□□□□ 0.83
MYCNP04198 RN7SKP253-201ENST00000516424 309 ntBASIC20.21■□□□□ 0.83
MYCNP04198 RNA5SP416-201ENST00000516838 111 ntBASIC20.21■□□□□ 0.83
MYCNP04198 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.21■□□□□ 0.83
MYCNP04198 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 NKAPP1-205ENST00000585790 367 ntBASIC20.21■□□□□ 0.83
MYCNP04198 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC20.21■□□□□ 0.83
MYCNP04198 MTDHP4-201ENST00000600287 670 ntBASIC20.21■□□□□ 0.83
MYCNP04198 AC025062.2-201ENST00000605477 670 ntBASIC20.21■□□□□ 0.83
MYCNP04198 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.21■□□□□ 0.83
MYCNP04198 AL359742.1-201ENST00000622497 540 ntBASIC20.21■□□□□ 0.83
MYCNP04198 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.21■□□□□ 0.83
MYCNP04198 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MYCNP04198 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
MYCNP04198 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
MYCNP04198 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.2■□□□□ 0.82
MYCNP04198 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.2■□□□□ 0.82
MYCNP04198 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.2■□□□□ 0.82
MYCNP04198 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.2■□□□□ 0.82
MYCNP04198 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MYCNP04198 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms