Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTNND1O60716 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.46■□□□□ 0.87
CTNND1O60716 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CTNND1O60716 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTNND1O60716 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTNND1O60716 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
CTNND1O60716 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CTNND1O60716 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.45■□□□□ 0.87
CTNND1O60716 AC026471.1-201ENST00000564629 3026 ntBASIC20.45■□□□□ 0.87
CTNND1O60716 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CTNND1O60716 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.45■□□□□ 0.86
CTNND1O60716 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CTNND1O60716 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.45■□□□□ 0.86
CTNND1O60716 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 CEND1P1-201ENST00000451006 455 ntBASIC20.45■□□□□ 0.86
CTNND1O60716 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.45■□□□□ 0.86
CTNND1O60716 KRT19P2-202ENST00000557173 1012 ntBASIC20.45■□□□□ 0.86
CTNND1O60716 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CTNND1O60716 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CTNND1O60716 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CTNND1O60716 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.45■□□□□ 0.86
CTNND1O60716 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTNND1O60716 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.44■□□□□ 0.86
CTNND1O60716 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CTNND1O60716 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.44■□□□□ 0.86
CTNND1O60716 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 AP000997.3-201ENST00000623333 2250 ntBASIC20.44■□□□□ 0.86
CTNND1O60716 BCAR1-209ENST00000546196 1340 ntBASIC20.44■□□□□ 0.86
CTNND1O60716 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.44■□□□□ 0.86
CTNND1O60716 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTNND1O60716 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CTNND1O60716 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTNND1O60716 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTNND1O60716 REXO1L9P-201ENST00000604264 2108 ntBASIC20.44■□□□□ 0.86
CTNND1O60716 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CTNND1O60716 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.43■□□□□ 0.86
CTNND1O60716 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 ACTG1P4-201ENST00000425123 1122 ntBASIC20.43■□□□□ 0.86
CTNND1O60716 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.43■□□□□ 0.86
CTNND1O60716 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.43■□□□□ 0.86
CTNND1O60716 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.43■□□□□ 0.86
CTNND1O60716 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.43■□□□□ 0.86
CTNND1O60716 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.43■□□□□ 0.86
CTNND1O60716 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.43■□□□□ 0.86
CTNND1O60716 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.43■□□□□ 0.86
CTNND1O60716 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.43■□□□□ 0.86
CTNND1O60716 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.43■□□□□ 0.86
CTNND1O60716 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CTNND1O60716 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTNND1O60716 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms