Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.49■□□□□ 0.39
KLHL41O60662 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.49■□□□□ 0.39
KLHL41O60662 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
KLHL41O60662 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.49■□□□□ 0.39
KLHL41O60662 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 AL121761.2-201ENST00000598007 1648 ntBASIC17.49■□□□□ 0.39
KLHL41O60662 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
KLHL41O60662 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KLHL41O60662 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.49■□□□□ 0.39
KLHL41O60662 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.48■□□□□ 0.39
KLHL41O60662 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KLHL41O60662 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.48■□□□□ 0.39
KLHL41O60662 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.48■□□□□ 0.39
KLHL41O60662 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.48■□□□□ 0.39
KLHL41O60662 GCSHP2-201ENST00000560971 527 ntBASIC17.48■□□□□ 0.39
KLHL41O60662 AL691432.3-201ENST00000621860 400 ntBASIC17.48■□□□□ 0.39
KLHL41O60662 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.48■□□□□ 0.39
KLHL41O60662 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KLHL41O60662 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
KLHL41O60662 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KLHL41O60662 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.47■□□□□ 0.39
KLHL41O60662 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 UBALD1-205ENST00000590891 2641 ntBASIC17.47■□□□□ 0.39
KLHL41O60662 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
KLHL41O60662 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 HCG4P8-203ENST00000443049 980 ntBASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.47■□□□□ 0.39
KLHL41O60662 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.47■□□□□ 0.39
KLHL41O60662 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
KLHL41O60662 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.47■□□□□ 0.39
KLHL41O60662 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.47■□□□□ 0.39
KLHL41O60662 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.47■□□□□ 0.39
KLHL41O60662 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
KLHL41O60662 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.47■□□□□ 0.39
KLHL41O60662 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.47■□□□□ 0.39
KLHL41O60662 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KLHL41O60662 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.46■□□□□ 0.39
KLHL41O60662 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KLHL41O60662 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KLHL41O60662 AC132938.6-201ENST00000623828 1655 ntBASIC17.46■□□□□ 0.39
KLHL41O60662 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms