Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 AC011467.2-201ENST00000598425 242 ntBASIC13.51□□□□□ -0.25
NDUFA4O00483 AL139327.4-201ENST00000612362 153 ntBASIC13.51□□□□□ -0.25
NDUFA4O00483 NPAP1P7-201ENST00000613027 823 ntBASIC13.51□□□□□ -0.25
NDUFA4O00483 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA4O00483 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA4O00483 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA4O00483 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA4O00483 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFA4O00483 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFA4O00483 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA4O00483 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA4O00483 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA4O00483 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NDUFA4O00483 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA4O00483 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA4O00483 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 AL023806.1-201ENST00000603994 1649 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.5□□□□□ -0.25
NDUFA4O00483 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 AC016396.2-201ENST00000562575 1417 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
NDUFA4O00483 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
NDUFA4O00483 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
NDUFA4O00483 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.5□□□□□ -0.25
NDUFA4O00483 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA4O00483 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA4O00483 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA4O00483 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.5□□□□□ -0.25
NDUFA4O00483 AC074051.2-201ENST00000565115 352 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 AC012615.1-201ENST00000565797 1299 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 MIR3180-1-201ENST00000580374 94 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 AP005901.3-202ENST00000581653 237 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 MIR3180-3-201ENST00000584616 94 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 AC092329.2-201ENST00000598402 547 ntBASIC13.5□□□□□ -0.25
NDUFA4O00483 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA4O00483 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA4O00483 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA4O00483 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA4O00483 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA4O00483 NSUN5P1-202ENST00000421140 1535 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 NSUN5P2-203ENST00000457352 1529 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA4O00483 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA4O00483 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NDUFA4O00483 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.49□□□□□ -0.25
NDUFA4O00483 POM121L3P-201ENST00000419331 1163 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA4O00483 AC091607.1-201ENST00000490318 1060 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 AP000867.3-201ENST00000524675 377 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.49□□□□□ -0.25
NDUFA4O00483 AC109462.3-201ENST00000573934 613 ntBASIC13.49□□□□□ -0.25
NDUFA4O00483 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.49□□□□□ -0.25
NDUFA4O00483 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA4O00483 AC019129.2-201ENST00000609837 1235 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms