Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 KRT8P47-201ENST00000604727 1398 ntBASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 NUS1P1-201ENST00000446295 882 ntBASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 AL732292.2-201ENST00000609649 430 ntBASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 AL022342.1-201ENST00000400363 863 ntBASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 UNC93B7-201ENST00000509439 705 ntBASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.18■□□□□ 0.18
RPH3AQ9Y2J0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 AC008764.6-201ENST00000595909 2069 ntBASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms