Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 AL773604.1-201ENST00000617417 272 ntBASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 AC139530.3-201ENST00000620344 690 ntBASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FNDC3AQ9Y2H6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 MIR574-201ENST00000385209 96 ntBASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 FAM197Y8-203ENST00000450145 560 ntBASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FNDC3AQ9Y2H6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
FNDC3AQ9Y2H6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 BNIP3P18-201ENST00000593976 575 ntBASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 AC117500.6-201ENST00000624871 588 ntBASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.01■□□□□ 0.47
FNDC3AQ9Y2H6 AC100803.2-201ENST00000562459 1963 ntBASIC18■□□□□ 0.47
FNDC3AQ9Y2H6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18■□□□□ 0.47
FNDC3AQ9Y2H6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms