Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.79■□□□□ 0.28
CCM2LQ9NUG4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 AP000692.2-201ENST00000608391 879 ntBASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 AL162727.3-201ENST00000635661 2787 ntBASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCM2LQ9NUG4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CICP6-201ENST00000457191 2729 ntBASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 AC022898.2-201ENST00000616822 1312 ntBASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 TSPY5P-201ENST00000426936 936 ntBASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 SLC25A1P4-201ENST00000567977 778 ntBASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCM2LQ9NUG4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 FLJ38576-201ENST00000623820 2459 ntBASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 AC060834.1-201ENST00000443027 2032 ntBASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.77■□□□□ 0.27
CCM2LQ9NUG4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.76■□□□□ 0.27
CCM2LQ9NUG4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms