Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.55■□□□□ 0.4
TREX1Q9NSU2 KRT8P10-201ENST00000450021 1447 ntBASIC17.55■□□□□ 0.4
TREX1Q9NSU2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX1Q9NSU2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 AP002414.4-201ENST00000589764 1148 ntBASIC17.54■□□□□ 0.4
TREX1Q9NSU2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 AP000550.4-202ENST00000639755 178 ntBASIC17.54■□□□□ 0.4
TREX1Q9NSU2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 AL353593.2-201ENST00000602529 1483 ntBASIC17.54■□□□□ 0.4
TREX1Q9NSU2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX1Q9NSU2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 AC022211.2-201ENST00000585075 2527 ntBASIC17.53■□□□□ 0.4
TREX1Q9NSU2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 AC106820.2-201ENST00000563775 3264 ntBASIC17.53■□□□□ 0.4
TREX1Q9NSU2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 MIR3180-1-201ENST00000580374 94 ntBASIC17.53■□□□□ 0.4
TREX1Q9NSU2 MIR3180-3-201ENST00000584616 94 ntBASIC17.53■□□□□ 0.4
TREX1Q9NSU2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREX1Q9NSU2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 TOB2P1-201ENST00000469761 992 ntBASIC17.52■□□□□ 0.4
TREX1Q9NSU2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 KRT18P35-201ENST00000510488 1269 ntBASIC17.52■□□□□ 0.4
TREX1Q9NSU2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 STK25P1-201ENST00000585406 838 ntBASIC17.52■□□□□ 0.4
TREX1Q9NSU2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 NPAP1P7-201ENST00000613027 823 ntBASIC17.52■□□□□ 0.4
TREX1Q9NSU2 AL358472.4-201ENST00000633140 710 ntBASIC17.52■□□□□ 0.4
TREX1Q9NSU2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.52■□□□□ 0.4
TREX1Q9NSU2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms