Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 ECEL1P3-201ENST00000427961 737 ntBASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 TNRC18P3-201ENST00000441896 2691 ntBASIC12.14□□□□□ -0.47
CDC42SE2Q9NRR3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 KRT8P9-201ENST00000558927 1449 ntBASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 LINC01311-201ENST00000565162 1445 ntBASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 MMP23A-201ENST00000234610 1017 ntBASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AC112698.1-201ENST00000510299 916 ntBASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 AP006294.2-201ENST00000641667 209 ntBASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.13□□□□□ -0.47
CDC42SE2Q9NRR3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms