Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 NCF1C-201ENST00000438382 1427 ntBASIC18.15■□□□□ 0.5
BRD9Q9H8M2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
BRD9Q9H8M2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 METTL21AP1-201ENST00000438852 635 ntBASIC18.14■□□□□ 0.49
BRD9Q9H8M2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 AC108073.2-201ENST00000464002 357 ntBASIC18.14■□□□□ 0.49
BRD9Q9H8M2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 AL353593.2-201ENST00000602529 1483 ntBASIC18.14■□□□□ 0.49
BRD9Q9H8M2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BRD9Q9H8M2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 KLF4P1-201ENST00000412782 1185 ntBASIC18.13■□□□□ 0.49
BRD9Q9H8M2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 VN2R19P-201ENST00000442399 1052 ntBASIC18.13■□□□□ 0.49
BRD9Q9H8M2 DUTP2-201ENST00000519164 463 ntBASIC18.13■□□□□ 0.49
BRD9Q9H8M2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 MIR4469-201ENST00000583919 79 ntBASIC18.13■□□□□ 0.49
BRD9Q9H8M2 AC092865.6-201ENST00000642101 219 ntBASIC18.13■□□□□ 0.49
BRD9Q9H8M2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
BRD9Q9H8M2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 AL096828.2-201ENST00000567259 1965 ntBASIC18.12■□□□□ 0.49
BRD9Q9H8M2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 SIGLEC30P-201ENST00000455569 941 ntBASIC18.12■□□□□ 0.49
BRD9Q9H8M2 ALG1L5P-201ENST00000482043 771 ntBASIC18.12■□□□□ 0.49
BRD9Q9H8M2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 AC018845.2-201ENST00000568326 409 ntBASIC18.12■□□□□ 0.49
BRD9Q9H8M2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 LINC02084-201ENST00000606069 1096 ntBASIC18.12■□□□□ 0.49
BRD9Q9H8M2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.12■□□□□ 0.49
BRD9Q9H8M2 AC132938.5-201ENST00000624980 1813 ntBASIC18.12■□□□□ 0.49
BRD9Q9H8M2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms