Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 RNU6-304P-201ENST00000364855 107 ntBASIC19.7■□□□□ 0.74
RNF39Q9H2S5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 RNASEH2B-AS1-201ENST00000454605 1007 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 BNIP3P24-201ENST00000593398 557 ntBASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AC108747.1-201ENST00000609508 535 ntBASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 PPP2R2DP1-201ENST00000420526 637 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 TSPY12P-201ENST00000421279 868 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 TPTE2P1-204ENST00000435256 593 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 RPL26L1-206ENST00000521476 742 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC236972.3-202ENST00000620734 1222 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC078883.4-201ENST00000623218 367 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC090772.4-201ENST00000623599 362 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC017037.4-201ENST00000624526 826 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 AC106872.6-201ENST00000514228 1346 ntBASIC19.69■□□□□ 0.74
RNF39Q9H2S5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF39Q9H2S5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 OR8V1P-201ENST00000395193 873 ntBASIC19.68■□□□□ 0.74
RNF39Q9H2S5 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AL035246.1-201ENST00000433554 1255 ntBASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AC069540.1-201ENST00000446320 988 ntBASIC19.68■□□□□ 0.74
RNF39Q9H2S5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AC140725.3-201ENST00000616193 880 ntBASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AL031008.1-201ENST00000619963 541 ntBASIC19.68■□□□□ 0.74
RNF39Q9H2S5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF39Q9H2S5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms