Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.17■■□□□ 1.3
ABCA3Q99758 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 NOP2-220ENST00000545915 630 ntTSL 2 BASIC23.17■■□□□ 1.3
ABCA3Q99758 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ABCA3Q99758 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC23.17■■□□□ 1.3
ABCA3Q99758 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
ABCA3Q99758 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ABCA3Q99758 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
ABCA3Q99758 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.17■■□□□ 1.3
ABCA3Q99758 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ABCA3Q99758 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
ABCA3Q99758 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC23.16■■□□□ 1.3
ABCA3Q99758 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 TSSK5P-201ENST00000423978 907 ntBASIC23.16■■□□□ 1.3
ABCA3Q99758 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC23.16■■□□□ 1.3
ABCA3Q99758 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC23.16■■□□□ 1.3
ABCA3Q99758 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC23.16■■□□□ 1.3
ABCA3Q99758 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC23.16■■□□□ 1.3
ABCA3Q99758 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.16■■□□□ 1.3
ABCA3Q99758 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.16■■□□□ 1.3
ABCA3Q99758 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.16■■□□□ 1.3
ABCA3Q99758 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 AC116562.4-201ENST00000641316 2276 ntBASIC23.16■■□□□ 1.3
ABCA3Q99758 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC23.16■■□□□ 1.3
ABCA3Q99758 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ABCA3Q99758 AC116407.2-201ENST00000613639 860 ntBASIC23.16■■□□□ 1.3
ABCA3Q99758 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
ABCA3Q99758 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
ABCA3Q99758 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.16■■□□□ 1.3
ABCA3Q99758 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
ABCA3Q99758 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCA3Q99758 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCA3Q99758 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ABCA3Q99758 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC23.15■■□□□ 1.3
ABCA3Q99758 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC23.15■■□□□ 1.3
ABCA3Q99758 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.15■■□□□ 1.3
ABCA3Q99758 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCA3Q99758 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.15■■□□□ 1.3
ABCA3Q99758 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCA3Q99758 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.15■■□□□ 1.3
ABCA3Q99758 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ABCA3Q99758 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.15■■□□□ 1.3
ABCA3Q99758 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC23.15■■□□□ 1.3
ABCA3Q99758 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ABCA3Q99758 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.14■■□□□ 1.3
ABCA3Q99758 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
ABCA3Q99758 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
ABCA3Q99758 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCA3Q99758 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCA3Q99758 SPDYE7P-202ENST00000420373 878 ntBASIC23.14■■□□□ 1.3
ABCA3Q99758 AL671277.1-201ENST00000429656 993 ntBASIC23.14■■□□□ 1.3
ABCA3Q99758 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCA3Q99758 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCA3Q99758 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
ABCA3Q99758 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC23.14■■□□□ 1.3
ABCA3Q99758 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.14■■□□□ 1.3
ABCA3Q99758 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.14■■□□□ 1.3
ABCA3Q99758 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ABCA3Q99758 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.14■■□□□ 1.29
ABCA3Q99758 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
ABCA3Q99758 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
ABCA3Q99758 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.14■■□□□ 1.29
ABCA3Q99758 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ABCA3Q99758 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ABCA3Q99758 AC093677.2-201ENST00000600169 1863 ntBASIC23.14■■□□□ 1.29
ABCA3Q99758 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC23.13■■□□□ 1.29
ABCA3Q99758 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCA3Q99758 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
ABCA3Q99758 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCA3Q99758 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ABCA3Q99758 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.13■■□□□ 1.29
ABCA3Q99758 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ABCA3Q99758 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC23.13■■□□□ 1.29
ABCA3Q99758 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC23.13■■□□□ 1.29
ABCA3Q99758 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC23.13■■□□□ 1.29
ABCA3Q99758 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC23.13■■□□□ 1.29
ABCA3Q99758 AC097493.3-201ENST00000509725 367 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms