Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 ATP5G2P1-201ENST00000433580 426 ntBASIC20.84■□□□□ 0.93
NEK1Q96PY6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 AC109462.3-201ENST00000573934 613 ntBASIC20.84■□□□□ 0.93
NEK1Q96PY6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 AL049757.1-201ENST00000616842 1596 ntBASIC20.84■□□□□ 0.93
NEK1Q96PY6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NEK1Q96PY6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEK1Q96PY6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 AC011467.2-201ENST00000598425 242 ntBASIC20.83■□□□□ 0.93
NEK1Q96PY6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.83■□□□□ 0.93
NEK1Q96PY6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEK1Q96PY6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.83■□□□□ 0.92
NEK1Q96PY6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.83■□□□□ 0.92
NEK1Q96PY6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.83■□□□□ 0.92
NEK1Q96PY6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.83■□□□□ 0.92
NEK1Q96PY6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 NSUN5P1-202ENST00000421140 1535 ntBASIC20.83■□□□□ 0.92
NEK1Q96PY6 NSUN5P2-203ENST00000457352 1529 ntBASIC20.83■□□□□ 0.92
NEK1Q96PY6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
NEK1Q96PY6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.83■□□□□ 0.92
NEK1Q96PY6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEK1Q96PY6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 TP73-AS1-210ENST00000637775 1455 ntBASIC20.82■□□□□ 0.92
NEK1Q96PY6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 AC103564.2-201ENST00000432853 1299 ntBASIC20.82■□□□□ 0.92
NEK1Q96PY6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 AC092119.3-201ENST00000612618 583 ntBASIC20.82■□□□□ 0.92
NEK1Q96PY6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.82■□□□□ 0.92
NEK1Q96PY6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEK1Q96PY6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 MINOS1P3-201ENST00000457048 203 ntBASIC20.81■□□□□ 0.92
NEK1Q96PY6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 IGHV3-52-201ENST00000519770 353 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms