Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 RNF126P1-202ENST00000569893 925 ntBASIC13.02□□□□□ -0.33
ODF3Q96PU9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 AC090616.6-201ENST00000582640 721 ntBASIC13.02□□□□□ -0.33
ODF3Q96PU9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 AC083849.1-201ENST00000615227 514 ntBASIC13.02□□□□□ -0.33
ODF3Q96PU9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 AP001094.4-201ENST00000579008 2176 ntBASIC13.02□□□□□ -0.33
ODF3Q96PU9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
ODF3Q96PU9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ODF3Q96PU9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 SPDYE13P-201ENST00000445314 798 ntBASIC13.01□□□□□ -0.33
ODF3Q96PU9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 AC116353.5-201ENST00000638148 1699 ntBASIC13.01□□□□□ -0.33
ODF3Q96PU9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ODF3Q96PU9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ODF3Q96PU9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ODF3Q96PU9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13□□□□□ -0.33
ODF3Q96PU9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13□□□□□ -0.33
ODF3Q96PU9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
ODF3Q96PU9 AC246785.2-201ENST00000432512 513 ntBASIC13□□□□□ -0.33
ODF3Q96PU9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13□□□□□ -0.33
ODF3Q96PU9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ODF3Q96PU9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ODF3Q96PU9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13□□□□□ -0.33
ODF3Q96PU9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms