Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 CRB3P1-201ENST00000449338 276 ntBASIC14.87□□□□□ -0.03
SPG11Q96JI7 AC067863.1-201ENST00000494933 530 ntBASIC14.87□□□□□ -0.03
SPG11Q96JI7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPG11Q96JI7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SPG11Q96JI7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 FAM86GP-201ENST00000448322 971 ntBASIC14.86□□□□□ -0.03
SPG11Q96JI7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.86□□□□□ -0.03
SPG11Q96JI7 AC022494.1-201ENST00000466044 728 ntBASIC14.86□□□□□ -0.03
SPG11Q96JI7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.86□□□□□ -0.03
SPG11Q96JI7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPG11Q96JI7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.85□□□□□ -0.03
SPG11Q96JI7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 FAM58DP-201ENST00000428076 619 ntBASIC14.85□□□□□ -0.03
SPG11Q96JI7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 AP001059.3-201ENST00000619053 235 ntBASIC14.85□□□□□ -0.03
SPG11Q96JI7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.85□□□□□ -0.03
SPG11Q96JI7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPG11Q96JI7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPG11Q96JI7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPG11Q96JI7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms