Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC111152.3-201ENST00000569699 673 ntBASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDLIM5Q96HC4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 STK25P1-201ENST00000585406 838 ntBASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 Z69720.1-201ENST00000601483 472 ntBASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 KRT8P10-201ENST00000450021 1447 ntBASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDLIM5Q96HC4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 AD001527.2-201ENST00000622994 785 ntBASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 AC099398.1-201ENST00000567919 2776 ntBASIC17.17■□□□□ 0.34
PDLIM5Q96HC4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 AC090340.1-201ENST00000620778 4980 ntBASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 HCG11-201ENST00000411553 5696 ntBASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.16■□□□□ 0.34
PDLIM5Q96HC4 IGHV3-47-201ENST00000425060 335 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms