Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01006Q8NI28 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 HCG11-201ENST00000411553 5696 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 AC074386.1-202ENST00000463561 864 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CYMP-203ENST00000474680 1263 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 AL031432.2-201ENST00000566714 459 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 AL928711.1-201ENST00000570165 459 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 AC007064.4-201ENST00000637740 555 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 AP000997.3-201ENST00000623333 2250 ntBASIC13.63□□□□□ -0.23
LINC01006Q8NI28 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LINC01006Q8NI28 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 RNF165-205ENST00000588679 2904 ntBASIC13.62□□□□□ -0.23
LINC01006Q8NI28 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 ACTG1P14-201ENST00000446382 1122 ntBASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC023141.13-201ENST00000604991 943 ntBASIC13.62□□□□□ -0.23
LINC01006Q8NI28 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01006Q8NI28 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LINC01006Q8NI28 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms