Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 RCN1P2-201ENST00000398357 915 ntBASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
COLCA1Q6ZS62 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 UPK3BP1-201ENST00000428678 509 ntBASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 AC096582.2-201ENST00000510860 516 ntBASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
COLCA1Q6ZS62 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 AC020916.1-201ENST00000587762 1774 ntBASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COLCA1Q6ZS62 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 AC116353.5-201ENST00000638148 1699 ntBASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 PMPCAP1-201ENST00000508114 1576 ntBASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.12■□□□□ 0.01
COLCA1Q6ZS62 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms