Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM53Q6P2H8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TMEM53Q6P2H8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 AC140113.3-201ENST00000605663 199 ntBASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM53Q6P2H8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 MYLKP1-201ENST00000509077 1580 ntBASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 AL031432.5-201ENST00000641059 760 ntBASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM53Q6P2H8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 TERF1P1-201ENST00000311003 1181 ntBASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms