Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD4Q5XG99 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 AC092474.2-201ENST00000424288 719 ntBASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 COX20P2-201ENST00000452636 358 ntBASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 HLA-J-203ENST00000494367 1087 ntBASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 AC022145.2-201ENST00000598203 171 ntBASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD4Q5XG99 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 ACTG1P4-201ENST00000425123 1122 ntBASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 FAM86GP-201ENST00000448322 971 ntBASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 AC112191.1-201ENST00000523689 701 ntBASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 AC239800.4-201ENST00000603712 296 ntBASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 AL121761.2-201ENST00000598007 1648 ntBASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD4Q5XG99 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 AL513480.1-201ENST00000451731 511 ntBASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms