Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 CTBP2P3-201ENST00000585629 1255 ntBASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 MIR346-201ENST00000362234 95 ntBASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL13A1Q5TAT6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 COX5BP2-201ENST00000392354 334 ntBASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 CALR4P-201ENST00000431943 946 ntBASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 DOC2GP-202ENST00000514950 1163 ntBASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 AC018529.1-201ENST00000613063 361 ntBASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL13A1Q5TAT6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 RPL17P11-201ENST00000417593 544 ntBASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 TEX28P1-201ENST00000613479 1221 ntBASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 TEX28P2-201ENST00000617764 1221 ntBASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
COL13A1Q5TAT6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms