Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 FLJ38576-201ENST00000623820 2459 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 AC012618.2-201ENST00000428058 849 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 KRT18P65-201ENST00000439811 1286 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 AC113404.2-201ENST00000507884 177 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 CD99P1-205ENST00000527459 561 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 AL049637.2-201ENST00000641778 930 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 AC116353.5-201ENST00000638148 1699 ntBASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.06□□□□□ -0.48
LINC00242Q5T6M2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 KRT8P47-201ENST00000604727 1398 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 PCDH8P1-201ENST00000428983 2773 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 UNC93B2-201ENST00000285383 730 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 PVRIG2P-201ENST00000435460 978 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 MIR3917-201ENST00000580971 93 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AC233702.5-201ENST00000584107 538 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AC010653.2-201ENST00000623505 997 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AC092865.7-201ENST00000641832 219 ntBASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC00242Q5T6M2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms