Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 KRT8P10-201ENST00000450021 1447 ntBASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 AC096582.2-201ENST00000510860 516 ntBASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 AC092329.2-201ENST00000598402 547 ntBASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSL3PQ5NE16 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSL3PQ5NE16 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 RCN1P2-201ENST00000398357 915 ntBASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 AC103564.2-201ENST00000432853 1299 ntBASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 IGHV3-52-201ENST00000519770 353 ntBASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 INTS4P1-201ENST00000438455 1935 ntBASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSL3PQ5NE16 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AL353593.2-201ENST00000602529 1483 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AC138932.1-201ENST00000534164 6830 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AC106820.2-201ENST00000563775 3264 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 UPK3BP1-201ENST00000428678 509 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AC104819.1-201ENST00000504587 486 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AC012615.1-201ENST00000565797 1299 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSL3PQ5NE16 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms