Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.78■□□□□ 0.6
CDR2Q01850 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.78■□□□□ 0.6
CDR2Q01850 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDR2Q01850 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.77■□□□□ 0.6
CDR2Q01850 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 AL121672.3-201ENST00000608644 468 ntBASIC18.77■□□□□ 0.6
CDR2Q01850 AC116407.4-201ENST00000623319 1061 ntBASIC18.77■□□□□ 0.6
CDR2Q01850 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.77■□□□□ 0.6
CDR2Q01850 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDR2Q01850 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.77■□□□□ 0.59
CDR2Q01850 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDR2Q01850 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDR2Q01850 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDR2Q01850 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDR2Q01850 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDR2Q01850 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.76■□□□□ 0.59
CDR2Q01850 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.76■□□□□ 0.59
CDR2Q01850 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 CHCHD2P8-201ENST00000429873 447 ntBASIC18.76■□□□□ 0.59
CDR2Q01850 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.76■□□□□ 0.59
CDR2Q01850 BX276092.5-203ENST00000456199 560 ntBASIC18.76■□□□□ 0.59
CDR2Q01850 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.76■□□□□ 0.59
CDR2Q01850 AL139327.4-201ENST00000612362 153 ntBASIC18.76■□□□□ 0.59
CDR2Q01850 AL590326.2-201ENST00000625139 305 ntBASIC18.76■□□□□ 0.59
CDR2Q01850 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.76■□□□□ 0.59
CDR2Q01850 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 AC016734.2-201ENST00000624325 1377 ntBASIC18.76■□□□□ 0.59
CDR2Q01850 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.76■□□□□ 0.59
CDR2Q01850 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDR2Q01850 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDR2Q01850 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDR2Q01850 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.75■□□□□ 0.59
CDR2Q01850 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.75■□□□□ 0.59
CDR2Q01850 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 AP001094.4-201ENST00000579008 2176 ntBASIC18.75■□□□□ 0.59
CDR2Q01850 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDR2Q01850 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.75■□□□□ 0.59
CDR2Q01850 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.75■□□□□ 0.59
CDR2Q01850 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.75■□□□□ 0.59
CDR2Q01850 AC246785.2-201ENST00000432512 513 ntBASIC18.75■□□□□ 0.59
CDR2Q01850 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.75■□□□□ 0.59
CDR2Q01850 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.75■□□□□ 0.59
CDR2Q01850 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.75■□□□□ 0.59
CDR2Q01850 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.75■□□□□ 0.59
CDR2Q01850 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.75■□□□□ 0.59
CDR2Q01850 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.75■□□□□ 0.59
CDR2Q01850 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
CDR2Q01850 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDR2Q01850 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.74■□□□□ 0.59
CDR2Q01850 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms