Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP46P62068 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.52■□□□□ 0.55
USP46P62068 AL390961.4-201ENST00000623958 2535 ntBASIC18.52■□□□□ 0.55
USP46P62068 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP46P62068 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP46P62068 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
USP46P62068 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP46P62068 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
USP46P62068 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP46P62068 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 IL9RP2-201ENST00000423948 1312 ntBASIC18.51■□□□□ 0.55
USP46P62068 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
USP46P62068 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
USP46P62068 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.51■□□□□ 0.55
USP46P62068 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP46P62068 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.51■□□□□ 0.55
USP46P62068 AC116407.2-201ENST00000613639 860 ntBASIC18.51■□□□□ 0.55
USP46P62068 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.51■□□□□ 0.55
USP46P62068 AC073592.5-201ENST00000624854 528 ntBASIC18.51■□□□□ 0.55
USP46P62068 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USP46P62068 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
USP46P62068 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 AC099398.1-201ENST00000567919 2776 ntBASIC18.51■□□□□ 0.55
USP46P62068 AL353593.2-201ENST00000602529 1483 ntBASIC18.51■□□□□ 0.55
USP46P62068 AC132938.5-201ENST00000624980 1813 ntBASIC18.51■□□□□ 0.55
USP46P62068 AC020763.4-201ENST00000623414 4170 ntBASIC18.51■□□□□ 0.55
USP46P62068 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.51■□□□□ 0.55
USP46P62068 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.51■□□□□ 0.55
USP46P62068 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.5■□□□□ 0.55
USP46P62068 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.5■□□□□ 0.55
USP46P62068 DDX43P3-201ENST00000441064 443 ntBASIC18.5■□□□□ 0.55
USP46P62068 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 SLC25A1P1-201ENST00000528351 927 ntBASIC18.5■□□□□ 0.55
USP46P62068 AC012640.2-201ENST00000561606 901 ntBASIC18.5■□□□□ 0.55
USP46P62068 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
USP46P62068 MTDHP4-201ENST00000600287 670 ntBASIC18.5■□□□□ 0.55
USP46P62068 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.5■□□□□ 0.55
USP46P62068 AC073592.4-201ENST00000623827 446 ntBASIC18.5■□□□□ 0.55
USP46P62068 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.5■□□□□ 0.55
USP46P62068 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.5■□□□□ 0.55
USP46P62068 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP46P62068 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
USP46P62068 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
USP46P62068 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.49■□□□□ 0.55
USP46P62068 SPDYE21P-201ENST00000413323 827 ntBASIC18.49■□□□□ 0.55
USP46P62068 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.49■□□□□ 0.55
USP46P62068 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP46P62068 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
USP46P62068 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.49■□□□□ 0.55
USP46P62068 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms