Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AC009093.7-201ENST00000623853 1223 ntBASIC23.35■■□□□ 1.33
ZC3H6P61129 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.35■■□□□ 1.33
ZC3H6P61129 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.35■■□□□ 1.33
ZC3H6P61129 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.35■■□□□ 1.33
ZC3H6P61129 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
ZC3H6P61129 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.35■■□□□ 1.33
ZC3H6P61129 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.35■■□□□ 1.33
ZC3H6P61129 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H6P61129 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H6P61129 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC23.34■■□□□ 1.33
ZC3H6P61129 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
ZC3H6P61129 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H6P61129 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.34■■□□□ 1.33
ZC3H6P61129 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
ZC3H6P61129 DDX43P3-201ENST00000441064 443 ntBASIC23.34■■□□□ 1.33
ZC3H6P61129 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.34■■□□□ 1.33
ZC3H6P61129 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.34■■□□□ 1.33
ZC3H6P61129 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
ZC3H6P61129 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H6P61129 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 AC093677.2-201ENST00000600169 1863 ntBASIC23.34■■□□□ 1.33
ZC3H6P61129 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H6P61129 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ZC3H6P61129 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
ZC3H6P61129 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
ZC3H6P61129 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.33■■□□□ 1.33
ZC3H6P61129 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
ZC3H6P61129 CROCCP3-202ENST00000420820 1947 ntBASIC23.33■■□□□ 1.33
ZC3H6P61129 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ZC3H6P61129 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H6P61129 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.33■■□□□ 1.33
ZC3H6P61129 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.33■■□□□ 1.33
ZC3H6P61129 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.33■■□□□ 1.33
ZC3H6P61129 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
ZC3H6P61129 AJ011932.1-201ENST00000621707 465 ntBASIC23.33■■□□□ 1.33
ZC3H6P61129 AF228730.6-201ENST00000641497 218 ntBASIC23.33■■□□□ 1.33
ZC3H6P61129 AC084121.3-201ENST00000641716 218 ntBASIC23.33■■□□□ 1.33
ZC3H6P61129 AC105233.6-201ENST00000642093 218 ntBASIC23.33■■□□□ 1.33
ZC3H6P61129 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.33■■□□□ 1.33
ZC3H6P61129 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ZC3H6P61129 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZC3H6P61129 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.33■■□□□ 1.32
ZC3H6P61129 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.32■■□□□ 1.32
ZC3H6P61129 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.32■■□□□ 1.32
ZC3H6P61129 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.32■■□□□ 1.32
ZC3H6P61129 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.32■■□□□ 1.32
ZC3H6P61129 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.32■■□□□ 1.32
ZC3H6P61129 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
ZC3H6P61129 ACTG1P4-201ENST00000425123 1122 ntBASIC23.32■■□□□ 1.32
ZC3H6P61129 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.32■■□□□ 1.32
ZC3H6P61129 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZC3H6P61129 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.32■■□□□ 1.32
ZC3H6P61129 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.32■■□□□ 1.32
ZC3H6P61129 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.32■■□□□ 1.32
ZC3H6P61129 AC002558.1-201ENST00000488906 803 ntBASIC23.32■■□□□ 1.32
ZC3H6P61129 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.32■■□□□ 1.32
ZC3H6P61129 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.32■■□□□ 1.32
ZC3H6P61129 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.32■■□□□ 1.32
ZC3H6P61129 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.32■■□□□ 1.32
ZC3H6P61129 AC026120.1-201ENST00000611536 926 ntBASIC23.32■■□□□ 1.32
ZC3H6P61129 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H6P61129 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ZC3H6P61129 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms