Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RIPK4P57078 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC23.02■■□□□ 1.28
RIPK4P57078 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RIPK4P57078 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC23.02■■□□□ 1.28
RIPK4P57078 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RIPK4P57078 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RIPK4P57078 KLF4P1-201ENST00000412782 1185 ntBASIC23.02■■□□□ 1.28
RIPK4P57078 AL020989.1-201ENST00000422979 469 ntBASIC23.02■■□□□ 1.28
RIPK4P57078 KRT18P67-201ENST00000432816 1264 ntBASIC23.02■■□□□ 1.28
RIPK4P57078 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.02■■□□□ 1.28
RIPK4P57078 AC018712.1-201ENST00000455767 687 ntBASIC23.02■■□□□ 1.28
RIPK4P57078 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.02■■□□□ 1.28
RIPK4P57078 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 STK19B-204ENST00000512515 211 ntBASIC23.02■■□□□ 1.28
RIPK4P57078 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.02■■□□□ 1.28
RIPK4P57078 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RIPK4P57078 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.02■■□□□ 1.28
RIPK4P57078 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.28
RIPK4P57078 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RIPK4P57078 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.02■■□□□ 1.28
RIPK4P57078 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIPK4P57078 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RIPK4P57078 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.27
RIPK4P57078 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
RIPK4P57078 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.01■■□□□ 1.27
RIPK4P57078 HLA-J-201ENST00000462773 1622 ntBASIC23.01■■□□□ 1.27
RIPK4P57078 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 AC003669.1-201ENST00000334569 611 ntBASIC23.01■■□□□ 1.27
RIPK4P57078 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.01■■□□□ 1.27
RIPK4P57078 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RIPK4P57078 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RIPK4P57078 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 RNA5SP419-201ENST00000515908 135 ntBASIC23.01■■□□□ 1.27
RIPK4P57078 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.01■■□□□ 1.27
RIPK4P57078 MTDHP4-201ENST00000600287 670 ntBASIC23.01■■□□□ 1.27
RIPK4P57078 AC025062.2-201ENST00000605477 670 ntBASIC23.01■■□□□ 1.27
RIPK4P57078 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RIPK4P57078 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIPK4P57078 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.01■■□□□ 1.27
RIPK4P57078 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
RIPK4P57078 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RIPK4P57078 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC23■■□□□ 1.27
RIPK4P57078 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RIPK4P57078 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23■■□□□ 1.27
RIPK4P57078 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RIPK4P57078 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23■■□□□ 1.27
RIPK4P57078 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
RIPK4P57078 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23■■□□□ 1.27
RIPK4P57078 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
RIPK4P57078 AF186996.4-201ENST00000467186 377 ntBASIC23■■□□□ 1.27
RIPK4P57078 AC073648.2-201ENST00000510116 352 ntBASIC23■■□□□ 1.27
RIPK4P57078 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23■■□□□ 1.27
RIPK4P57078 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC23■■□□□ 1.27
RIPK4P57078 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23■■□□□ 1.27
RIPK4P57078 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23■■□□□ 1.27
RIPK4P57078 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC23■■□□□ 1.27
RIPK4P57078 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 HLA-A-201ENST00000376802 1334 ntBASIC23■■□□□ 1.27
RIPK4P57078 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23■■□□□ 1.27
RIPK4P57078 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 AC133963.1-201ENST00000504166 1679 ntBASIC23■■□□□ 1.27
RIPK4P57078 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIPK4P57078 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23■■□□□ 1.27
RIPK4P57078 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RIPK4P57078 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.99■■□□□ 1.27
RIPK4P57078 AC009336.1-201ENST00000608941 1553 ntBASIC22.99■■□□□ 1.27
RIPK4P57078 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RIPK4P57078 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RIPK4P57078 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RIPK4P57078 MYCLP1-201ENST00000372451 1075 ntBASIC22.99■■□□□ 1.27
RIPK4P57078 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RIPK4P57078 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RIPK4P57078 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RIPK4P57078 PRYP5-201ENST00000451909 266 ntBASIC22.99■■□□□ 1.27
RIPK4P57078 AL662844.1-201ENST00000546340 181 ntBASIC22.99■■□□□ 1.27
RIPK4P57078 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms