Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.69■□□□□ 0.74
CENPFP49454 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 ATP5G2P4-201ENST00000442175 420 ntBASIC19.69■□□□□ 0.74
CENPFP49454 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.69■□□□□ 0.74
CENPFP49454 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.69■□□□□ 0.74
CENPFP49454 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CENPFP49454 ANO7L1-203ENST00000602586 1720 ntBASIC19.69■□□□□ 0.74
CENPFP49454 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CENPFP49454 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPFP49454 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.68■□□□□ 0.74
CENPFP49454 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.68■□□□□ 0.74
CENPFP49454 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.68■□□□□ 0.74
CENPFP49454 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 AC092580.3-201ENST00000430932 139 ntBASIC19.68■□□□□ 0.74
CENPFP49454 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.68■□□□□ 0.74
CENPFP49454 AC027307.3-201ENST00000594262 1100 ntBASIC19.68■□□□□ 0.74
CENPFP49454 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CENPFP49454 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CENPFP49454 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.68■□□□□ 0.74
CENPFP49454 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.68■□□□□ 0.74
CENPFP49454 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.68■□□□□ 0.74
CENPFP49454 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPFP49454 MIR1909-201ENST00000411312 80 ntBASIC19.67■□□□□ 0.74
CENPFP49454 SLC25A39P2-201ENST00000537614 270 ntBASIC19.67■□□□□ 0.74
CENPFP49454 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.67■□□□□ 0.74
CENPFP49454 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CENPFP49454 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.67■□□□□ 0.74
CENPFP49454 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.67■□□□□ 0.74
CENPFP49454 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CENPFP49454 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CENPFP49454 PIN1P1-201ENST00000412108 996 ntBASIC19.67■□□□□ 0.74
CENPFP49454 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.67■□□□□ 0.74
CENPFP49454 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CENPFP49454 AC243562.1-201ENST00000560672 389 ntBASIC19.67■□□□□ 0.74
CENPFP49454 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.67■□□□□ 0.74
CENPFP49454 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.67■□□□□ 0.74
CENPFP49454 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.67■□□□□ 0.74
CENPFP49454 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPFP49454 SPDYE11-202ENST00000450699 704 ntBASIC19.66■□□□□ 0.74
CENPFP49454 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.66■□□□□ 0.74
CENPFP49454 AC004890.2-204ENST00000481968 304 ntBASIC19.66■□□□□ 0.74
CENPFP49454 SPDYE9P-201ENST00000570642 692 ntBASIC19.66■□□□□ 0.74
CENPFP49454 SPDYE10P-202ENST00000612005 668 ntBASIC19.66■□□□□ 0.74
CENPFP49454 SPDYE8P-202ENST00000612377 668 ntBASIC19.66■□□□□ 0.74
CENPFP49454 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CENPFP49454 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPFP49454 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms