Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC009154.2-201ENST00000621177 724 ntBASIC18.63■□□□□ 0.57
CTNNA1P35221 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CTNNA1P35221 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CTNNA1P35221 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CTNNA1P35221 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CTNNA1P35221 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNNA1P35221 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CTNNA1P35221 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.63■□□□□ 0.57
CTNNA1P35221 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CTNNA1P35221 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTNNA1P35221 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.62■□□□□ 0.57
CTNNA1P35221 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 AC018695.7-201ENST00000624587 2492 ntBASIC18.62■□□□□ 0.57
CTNNA1P35221 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CTNNA1P35221 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CTNNA1P35221 AC087499.1-201ENST00000418141 1075 ntBASIC18.62■□□□□ 0.57
CTNNA1P35221 HLA-F-220ENST00000434407 884 ntBASIC18.62■□□□□ 0.57
CTNNA1P35221 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNNA1P35221 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.62■□□□□ 0.57
CTNNA1P35221 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNNA1P35221 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.62■□□□□ 0.57
CTNNA1P35221 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 AC004263.2-201ENST00000617183 678 ntBASIC18.62■□□□□ 0.57
CTNNA1P35221 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CTNNA1P35221 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.62■□□□□ 0.57
CTNNA1P35221 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.62■□□□□ 0.57
CTNNA1P35221 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTNNA1P35221 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CTNNA1P35221 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CTNNA1P35221 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.62■□□□□ 0.57
CTNNA1P35221 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTNNA1P35221 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CTNNA1P35221 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTNNA1P35221 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNNA1P35221 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTNNA1P35221 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.61■□□□□ 0.57
CTNNA1P35221 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNNA1P35221 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNNA1P35221 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNNA1P35221 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNNA1P35221 AL441883.1-201ENST00000566170 1045 ntBASIC18.61■□□□□ 0.57
CTNNA1P35221 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.61■□□□□ 0.57
CTNNA1P35221 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CTNNA1P35221 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.61■□□□□ 0.57
CTNNA1P35221 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNNA1P35221 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CTNNA1P35221 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 SPDYE15P-201ENST00000424157 909 ntBASIC18.6■□□□□ 0.57
CTNNA1P35221 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.6■□□□□ 0.57
CTNNA1P35221 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTNNA1P35221 AC010203.1-204ENST00000548782 407 ntBASIC18.6■□□□□ 0.57
CTNNA1P35221 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNNA1P35221 AL031432.5-201ENST00000641059 760 ntBASIC18.6■□□□□ 0.57
CTNNA1P35221 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTNNA1P35221 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.6■□□□□ 0.57
CTNNA1P35221 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNNA1P35221 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNNA1P35221 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CTNNA1P35221 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTNNA1P35221 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms