Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC175P0C221 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC175P0C221 BX088651.1-201ENST00000540551 451 ntBASIC19.04■□□□□ 0.64
CCDC175P0C221 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.04■□□□□ 0.64
CCDC175P0C221 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC175P0C221 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC175P0C221 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC175P0C221 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC175P0C221 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 AL603756.1-201ENST00000606511 2163 ntBASIC19.03■□□□□ 0.64
CCDC175P0C221 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC175P0C221 AC092338.2-201ENST00000568827 1415 ntBASIC19.03■□□□□ 0.64
CCDC175P0C221 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC175P0C221 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 SEC1P-202ENST00000473944 940 ntBASIC19.03■□□□□ 0.64
CCDC175P0C221 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC175P0C221 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC175P0C221 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC175P0C221 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 AL359736.2-201ENST00000621992 437 ntBASIC19.03■□□□□ 0.64
CCDC175P0C221 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC175P0C221 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCDC175P0C221 KRT8P47-201ENST00000604727 1398 ntBASIC19.03■□□□□ 0.64
CCDC175P0C221 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC175P0C221 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC175P0C221 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC175P0C221 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC175P0C221 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCDC175P0C221 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
CCDC175P0C221 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCDC175P0C221 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.02■□□□□ 0.64
CCDC175P0C221 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC175P0C221 CCR12P-201ENST00000446203 998 ntBASIC19.02■□□□□ 0.64
CCDC175P0C221 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
CCDC175P0C221 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC175P0C221 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC175P0C221 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC175P0C221 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC175P0C221 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC175P0C221 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC175P0C221 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC175P0C221 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC175P0C221 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC175P0C221 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC175P0C221 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC175P0C221 AC008894.3-201ENST00000624324 3103 ntBASIC19.01■□□□□ 0.63
CCDC175P0C221 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC175P0C221 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC175P0C221 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC175P0C221 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms