Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM1P09493 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 DDX43P3-201ENST00000441064 443 ntBASIC19.44■□□□□ 0.7
TPM1P09493 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM1P09493 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM1P09493 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM1P09493 AC010653.2-201ENST00000623505 997 ntBASIC19.44■□□□□ 0.7
TPM1P09493 AC092865.7-201ENST00000641832 219 ntBASIC19.44■□□□□ 0.7
TPM1P09493 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.44■□□□□ 0.7
TPM1P09493 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.44■□□□□ 0.7
TPM1P09493 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.44■□□□□ 0.7
TPM1P09493 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.44■□□□□ 0.7
TPM1P09493 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TPM1P09493 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.43■□□□□ 0.7
TPM1P09493 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TPM1P09493 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TPM1P09493 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 AC007663.1-201ENST00000438948 1240 ntBASIC19.43■□□□□ 0.7
TPM1P09493 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 AC009949.1-201ENST00000623048 1830 ntBASIC19.43■□□□□ 0.7
TPM1P09493 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TPM1P09493 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TPM1P09493 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TPM1P09493 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TPM1P09493 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.43■□□□□ 0.7
TPM1P09493 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TPM1P09493 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM1P09493 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM1P09493 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.42■□□□□ 0.7
TPM1P09493 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 SEC1P-202ENST00000473944 940 ntBASIC19.42■□□□□ 0.7
TPM1P09493 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TPM1P09493 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TPM1P09493 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TPM1P09493 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM1P09493 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM1P09493 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
TPM1P09493 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM1P09493 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM1P09493 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM1P09493 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM1P09493 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM1P09493 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms