Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 RPSAP43-201ENST00000402237 625 ntBASIC20.25■□□□□ 0.83
MYCNP04198 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.25■□□□□ 0.83
MYCNP04198 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 PMS2P2-201ENST00000425039 1128 ntBASIC20.25■□□□□ 0.83
MYCNP04198 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC20.25■□□□□ 0.83
MYCNP04198 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.25■□□□□ 0.83
MYCNP04198 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.25■□□□□ 0.83
MYCNP04198 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC20.25■□□□□ 0.83
MYCNP04198 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.25■□□□□ 0.83
MYCNP04198 AC027796.2-201ENST00000575326 344 ntBASIC20.25■□□□□ 0.83
MYCNP04198 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.25■□□□□ 0.83
MYCNP04198 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC20.25■□□□□ 0.83
MYCNP04198 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MYCNP04198 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.25■□□□□ 0.83
MYCNP04198 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
MYCNP04198 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MYCNP04198 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 PPP2R2DP1-201ENST00000420526 637 ntBASIC20.24■□□□□ 0.83
MYCNP04198 GPX1P2-201ENST00000429271 606 ntBASIC20.24■□□□□ 0.83
MYCNP04198 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 AL591424.1-201ENST00000442569 1213 ntBASIC20.24■□□□□ 0.83
MYCNP04198 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.24■□□□□ 0.83
MYCNP04198 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 AC112482.1-201ENST00000492080 688 ntBASIC20.24■□□□□ 0.83
MYCNP04198 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.24■□□□□ 0.83
MYCNP04198 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 AC068408.1-201ENST00000577406 1144 ntBASIC20.24■□□□□ 0.83
MYCNP04198 AL138831.2-201ENST00000606564 490 ntBASIC20.24■□□□□ 0.83
MYCNP04198 AC018754.1-201ENST00000607486 925 ntBASIC20.24■□□□□ 0.83
MYCNP04198 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.24■□□□□ 0.83
MYCNP04198 AC009154.2-201ENST00000621177 724 ntBASIC20.24■□□□□ 0.83
MYCNP04198 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.24■□□□□ 0.83
MYCNP04198 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.24■□□□□ 0.83
MYCNP04198 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
MYCNP04198 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
MYCNP04198 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MYCNP04198 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 AL035563.1-201ENST00000609087 1539 ntBASIC20.23■□□□□ 0.83
MYCNP04198 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MYCNP04198 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 AFG3L1P-217ENST00000557444 2447 ntBASIC20.23■□□□□ 0.83
MYCNP04198 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.23■□□□□ 0.83
MYCNP04198 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.23■□□□□ 0.83
MYCNP04198 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.23■□□□□ 0.83
MYCNP04198 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC20.23■□□□□ 0.83
MYCNP04198 KRT18P41-201ENST00000518924 1277 ntBASIC20.23■□□□□ 0.83
MYCNP04198 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.23■□□□□ 0.83
MYCNP04198 AC011467.2-201ENST00000598425 242 ntBASIC20.23■□□□□ 0.83
MYCNP04198 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MYCNP04198 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 PKD1P1-201ENST00000458669 6805 ntBASIC20.23■□□□□ 0.83
MYCNP04198 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.23■□□□□ 0.83
MYCNP04198 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MYCNP04198 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
MYCNP04198 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MYCNP04198 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MYCNP04198 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.22■□□□□ 0.83
MYCNP04198 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.22■□□□□ 0.83
MYCNP04198 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms