Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPTA1P02549 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.91■□□□□ 0.14
SPTA1P02549 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPTA1P02549 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPTA1P02549 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.91■□□□□ 0.14
SPTA1P02549 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPTA1P02549 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.9■□□□□ 0.14
SPTA1P02549 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.9■□□□□ 0.14
SPTA1P02549 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC008761.3-201ENST00000624803 892 ntBASIC15.9■□□□□ 0.14
SPTA1P02549 AC025048.6-201ENST00000634326 1161 ntBASIC15.9■□□□□ 0.14
SPTA1P02549 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
SPTA1P02549 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC103564.2-201ENST00000432853 1299 ntBASIC15.9■□□□□ 0.14
SPTA1P02549 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 AC004706.3-202ENST00000621574 984 ntBASIC15.9■□□□□ 0.14
SPTA1P02549 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.9■□□□□ 0.14
SPTA1P02549 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SPTA1P02549 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPTA1P02549 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPTA1P02549 NME2P1-201ENST00000426182 414 ntBASIC15.89■□□□□ 0.13
SPTA1P02549 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.89■□□□□ 0.13
SPTA1P02549 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.89■□□□□ 0.13
SPTA1P02549 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.89■□□□□ 0.13
SPTA1P02549 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.89■□□□□ 0.13
SPTA1P02549 AC009093.7-201ENST00000623853 1223 ntBASIC15.89■□□□□ 0.13
SPTA1P02549 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPTA1P02549 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPTA1P02549 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.89■□□□□ 0.13
SPTA1P02549 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.89■□□□□ 0.13
SPTA1P02549 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SPTA1P02549 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SPTA1P02549 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.89■□□□□ 0.13
SPTA1P02549 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.89■□□□□ 0.13
SPTA1P02549 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.89■□□□□ 0.13
SPTA1P02549 AL161938.1-201ENST00000569833 2180 ntBASIC15.89■□□□□ 0.13
SPTA1P02549 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPTA1P02549 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPTA1P02549 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.89■□□□□ 0.13
SPTA1P02549 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SPTA1P02549 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SPTA1P02549 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.88■□□□□ 0.13
SPTA1P02549 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.88■□□□□ 0.13
SPTA1P02549 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.88■□□□□ 0.13
SPTA1P02549 AD001527.2-201ENST00000622994 785 ntBASIC15.88■□□□□ 0.13
SPTA1P02549 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.88■□□□□ 0.13
SPTA1P02549 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SPTA1P02549 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SPTA1P02549 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SPTA1P02549 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SPTA1P02549 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTA1P02549 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.88■□□□□ 0.13
SPTA1P02549 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.88■□□□□ 0.13
SPTA1P02549 FAM185BP-201ENST00000443595 716 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms