Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 COX5BP2-201ENST00000392354 334 ntBASIC17.05■□□□□ 0.32
CLDN9O95484 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN9O95484 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN9O95484 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN9O95484 AL136038.3-201ENST00000561909 1096 ntBASIC17.05■□□□□ 0.32
CLDN9O95484 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN9O95484 AC011498.5-201ENST00000592027 486 ntBASIC17.05■□□□□ 0.32
CLDN9O95484 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN9O95484 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN9O95484 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN9O95484 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN9O95484 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 AC010460.3-201ENST00000511359 1579 ntBASIC17.05■□□□□ 0.32
CLDN9O95484 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLDN9O95484 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLDN9O95484 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN9O95484 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN9O95484 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
CLDN9O95484 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN9O95484 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN9O95484 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN9O95484 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 PRORSD1P-202ENST00000563365 2154 ntBASIC17.04■□□□□ 0.32
CLDN9O95484 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN9O95484 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN9O95484 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 RN7SL606P-201ENST00000472779 293 ntBASIC17.04■□□□□ 0.32
CLDN9O95484 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN9O95484 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN9O95484 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN9O95484 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN9O95484 AC090616.6-201ENST00000582640 721 ntBASIC17.04■□□□□ 0.32
CLDN9O95484 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN9O95484 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.04■□□□□ 0.32
CLDN9O95484 AC124864.1-201ENST00000623408 392 ntBASIC17.04■□□□□ 0.32
CLDN9O95484 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN9O95484 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN9O95484 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN9O95484 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
CLDN9O95484 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN9O95484 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN9O95484 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN9O95484 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CLDN9O95484 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN9O95484 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 AC002558.1-201ENST00000488906 803 ntBASIC17.03■□□□□ 0.32
CLDN9O95484 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN9O95484 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 AL592071.1-201ENST00000611956 408 ntBASIC17.03■□□□□ 0.32
CLDN9O95484 IGHV3-41-201ENST00000613121 348 ntBASIC17.03■□□□□ 0.32
CLDN9O95484 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN9O95484 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.03■□□□□ 0.32
CLDN9O95484 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN9O95484 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN9O95484 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN9O95484 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN9O95484 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms