Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RTN3O95197 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RTN3O95197 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.56■□□□□ 0.56
RTN3O95197 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.56■□□□□ 0.56
RTN3O95197 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.56■□□□□ 0.56
RTN3O95197 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN3O95197 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.56■□□□□ 0.56
RTN3O95197 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RTN3O95197 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.56■□□□□ 0.56
RTN3O95197 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN3O95197 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.56■□□□□ 0.56
RTN3O95197 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RTN3O95197 AL773604.1-201ENST00000617417 272 ntBASIC18.56■□□□□ 0.56
RTN3O95197 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RTN3O95197 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RTN3O95197 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.56■□□□□ 0.56
RTN3O95197 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTN3O95197 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
RTN3O95197 PMPCAP1-201ENST00000508114 1576 ntBASIC18.55■□□□□ 0.56
RTN3O95197 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
RTN3O95197 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.55■□□□□ 0.56
RTN3O95197 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN3O95197 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.55■□□□□ 0.56
RTN3O95197 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN3O95197 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.55■□□□□ 0.56
RTN3O95197 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.55■□□□□ 0.56
RTN3O95197 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.55■□□□□ 0.56
RTN3O95197 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.55■□□□□ 0.56
RTN3O95197 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTN3O95197 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 AL391005.1-201ENST00000623953 2435 ntBASIC18.54■□□□□ 0.56
RTN3O95197 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 AC135050.7-201ENST00000624508 2218 ntBASIC18.54■□□□□ 0.56
RTN3O95197 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN3O95197 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RTN3O95197 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN3O95197 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.54■□□□□ 0.56
RTN3O95197 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RTN3O95197 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RTN3O95197 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RTN3O95197 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.53■□□□□ 0.56
RTN3O95197 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms