Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SEMA3DO95025 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA3DO95025 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA3DO95025 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEMA3DO95025 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SEMA3DO95025 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.89■□□□□ 0.3
SEMA3DO95025 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
SEMA3DO95025 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SEMA3DO95025 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
SEMA3DO95025 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA3DO95025 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 COX5BP2-201ENST00000392354 334 ntBASIC16.89■□□□□ 0.29
SEMA3DO95025 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 CHCHD2P8-201ENST00000429873 447 ntBASIC16.89■□□□□ 0.29
SEMA3DO95025 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.89■□□□□ 0.29
SEMA3DO95025 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.89■□□□□ 0.29
SEMA3DO95025 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
SEMA3DO95025 BX276092.5-203ENST00000456199 560 ntBASIC16.89■□□□□ 0.29
SEMA3DO95025 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA3DO95025 AC087388.1-201ENST00000571370 1112 ntBASIC16.89■□□□□ 0.29
SEMA3DO95025 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SEMA3DO95025 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.89■□□□□ 0.29
SEMA3DO95025 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SEMA3DO95025 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA3DO95025 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.89■□□□□ 0.29
SEMA3DO95025 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SEMA3DO95025 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA3DO95025 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SEMA3DO95025 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA3DO95025 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SEMA3DO95025 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 AL845331.1-201ENST00000424978 1190 ntBASIC16.88■□□□□ 0.29
SEMA3DO95025 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.88■□□□□ 0.29
SEMA3DO95025 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 AC011840.4-201ENST00000578471 627 ntBASIC16.88■□□□□ 0.29
SEMA3DO95025 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
SEMA3DO95025 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.88■□□□□ 0.29
SEMA3DO95025 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SEMA3DO95025 AC125634.1-201ENST00000438758 1403 ntBASIC16.87■□□□□ 0.29
SEMA3DO95025 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.87■□□□□ 0.29
SEMA3DO95025 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SEMA3DO95025 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SEMA3DO95025 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 AC141586.5-201ENST00000624546 2050 ntBASIC16.87■□□□□ 0.29
SEMA3DO95025 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SEMA3DO95025 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SEMA3DO95025 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.87■□□□□ 0.29
SEMA3DO95025 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
SEMA3DO95025 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEMA3DO95025 VENTXP7-201ENST00000475503 772 ntBASIC16.87■□□□□ 0.29
SEMA3DO95025 AC002558.1-201ENST00000488906 803 ntBASIC16.87■□□□□ 0.29
SEMA3DO95025 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.87■□□□□ 0.29
SEMA3DO95025 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms