Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.23■□□□□ 0.35
PEX1O43933 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.23■□□□□ 0.35
PEX1O43933 CR769767.2-201ENST00000622735 460 ntBASIC17.23■□□□□ 0.35
PEX1O43933 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PEX1O43933 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.23■□□□□ 0.35
PEX1O43933 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.23■□□□□ 0.35
PEX1O43933 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PEX1O43933 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PEX1O43933 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.23■□□□□ 0.35
PEX1O43933 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 NFIC-211ENST00000641145 8399 ntBASIC17.23■□□□□ 0.35
PEX1O43933 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PEX1O43933 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PEX1O43933 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.22■□□□□ 0.35
PEX1O43933 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 PCDH8P1-201ENST00000428983 2773 ntBASIC17.22■□□□□ 0.35
PEX1O43933 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 AL031133.1-201ENST00000406807 723 ntBASIC17.22■□□□□ 0.35
PEX1O43933 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.22■□□□□ 0.35
PEX1O43933 AL359075.1-203ENST00000462729 1002 ntBASIC17.22■□□□□ 0.35
PEX1O43933 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.22■□□□□ 0.35
PEX1O43933 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.22■□□□□ 0.35
PEX1O43933 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.22■□□□□ 0.35
PEX1O43933 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.22■□□□□ 0.35
PEX1O43933 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PEX1O43933 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 GPAT2P1-201ENST00000444924 1672 ntBASIC17.22■□□□□ 0.35
PEX1O43933 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
PEX1O43933 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PEX1O43933 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.21■□□□□ 0.35
PEX1O43933 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
PEX1O43933 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PEX1O43933 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PEX1O43933 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.21■□□□□ 0.35
PEX1O43933 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.21■□□□□ 0.35
PEX1O43933 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 AL023284.2-201ENST00000405850 579 ntBASIC17.21■□□□□ 0.35
PEX1O43933 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.21■□□□□ 0.35
PEX1O43933 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.21■□□□□ 0.35
PEX1O43933 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.21■□□□□ 0.35
PEX1O43933 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.21■□□□□ 0.35
PEX1O43933 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.21■□□□□ 0.35
PEX1O43933 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.21■□□□□ 0.35
PEX1O43933 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.21■□□□□ 0.35
PEX1O43933 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PEX1O43933 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.21■□□□□ 0.35
PEX1O43933 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PEX1O43933 KRT8P3-201ENST00000519669 1449 ntBASIC17.21■□□□□ 0.34
PEX1O43933 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PEX1O43933 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PEX1O43933 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.21■□□□□ 0.34
PEX1O43933 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PEX1O43933 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PEX1O43933 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PEX1O43933 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.2■□□□□ 0.34
PEX1O43933 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PEX1O43933 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PEX1O43933 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PEX1O43933 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PEX1O43933 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms