Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MSI1O43347 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MSI1O43347 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 AC004817.3-201ENST00000602957 2129 ntBASIC18.29■□□□□ 0.52
MSI1O43347 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
MSI1O43347 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.28■□□□□ 0.52
MSI1O43347 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 AC068880.1-201ENST00000507289 2297 ntBASIC18.28■□□□□ 0.52
MSI1O43347 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 FAM197Y8-203ENST00000450145 560 ntBASIC18.28■□□□□ 0.52
MSI1O43347 BX005266.1-201ENST00000473402 457 ntBASIC18.28■□□□□ 0.52
MSI1O43347 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.28■□□□□ 0.52
MSI1O43347 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 SLC25A6P4-201ENST00000586535 553 ntBASIC18.28■□□□□ 0.52
MSI1O43347 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.28■□□□□ 0.52
MSI1O43347 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 AC148477.8-201ENST00000624298 468 ntBASIC18.28■□□□□ 0.52
MSI1O43347 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
MSI1O43347 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
MSI1O43347 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MSI1O43347 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.28■□□□□ 0.52
MSI1O43347 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MSI1O43347 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 AL356309.3-201ENST00000624132 1934 ntBASIC18.27■□□□□ 0.52
MSI1O43347 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.27■□□□□ 0.52
MSI1O43347 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
MSI1O43347 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
MSI1O43347 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.27■□□□□ 0.52
MSI1O43347 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.27■□□□□ 0.52
MSI1O43347 FDX1P1-201ENST00000449115 551 ntBASIC18.27■□□□□ 0.52
MSI1O43347 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
MSI1O43347 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.27■□□□□ 0.52
MSI1O43347 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
MSI1O43347 NKAPP1-205ENST00000585790 367 ntBASIC18.27■□□□□ 0.52
MSI1O43347 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MSI1O43347 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MSI1O43347 LTB4R2-202ENST00000528054 3092 ntBASIC18.27■□□□□ 0.52
MSI1O43347 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MSI1O43347 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MSI1O43347 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
MSI1O43347 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.27■□□□□ 0.51
MSI1O43347 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.27■□□□□ 0.51
MSI1O43347 AC148477.5-201ENST00000625164 1645 ntBASIC18.27■□□□□ 0.51
MSI1O43347 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MSI1O43347 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MSI1O43347 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 LINC00304-203ENST00000565008 1864 ntBASIC18.26■□□□□ 0.51
MSI1O43347 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.26■□□□□ 0.51
MSI1O43347 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MSI1O43347 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.26■□□□□ 0.51
MSI1O43347 NOC2LP2-201ENST00000407594 1944 ntBASIC18.26■□□□□ 0.51
MSI1O43347 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MSI1O43347 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms