Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC113347.1-201ENST00000413321 391 ntBASIC16.78■□□□□ 0.28
CLOCKO15516 MFAP1P1-201ENST00000442257 1255 ntBASIC16.78■□□□□ 0.28
CLOCKO15516 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.78■□□□□ 0.28
CLOCKO15516 DUTP2-201ENST00000519164 463 ntBASIC16.78■□□□□ 0.28
CLOCKO15516 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.78■□□□□ 0.28
CLOCKO15516 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.78■□□□□ 0.28
CLOCKO15516 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 AC092865.7-201ENST00000641832 219 ntBASIC16.78■□□□□ 0.28
CLOCKO15516 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.78■□□□□ 0.28
CLOCKO15516 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLOCKO15516 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.77■□□□□ 0.28
CLOCKO15516 AC106886.4-201ENST00000623557 2502 ntBASIC16.77■□□□□ 0.28
CLOCKO15516 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.77■□□□□ 0.28
CLOCKO15516 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.77■□□□□ 0.28
CLOCKO15516 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.77■□□□□ 0.28
CLOCKO15516 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.77■□□□□ 0.28
CLOCKO15516 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLOCKO15516 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.77■□□□□ 0.28
CLOCKO15516 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CLOCKO15516 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLOCKO15516 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.77■□□□□ 0.28
CLOCKO15516 LINC00304-203ENST00000565008 1864 ntBASIC16.77■□□□□ 0.27
CLOCKO15516 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.77■□□□□ 0.27
CLOCKO15516 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.77■□□□□ 0.27
CLOCKO15516 PCDHA14-201ENST00000506751 2298 ntBASIC16.77■□□□□ 0.27
CLOCKO15516 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLOCKO15516 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLOCKO15516 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLOCKO15516 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLOCKO15516 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLOCKO15516 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLOCKO15516 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLOCKO15516 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CLOCKO15516 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 LIN28AP1-201ENST00000429574 405 ntBASIC16.76■□□□□ 0.27
CLOCKO15516 ATP5G1P1-201ENST00000448724 379 ntBASIC16.76■□□□□ 0.27
CLOCKO15516 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.76■□□□□ 0.27
CLOCKO15516 AL049597.2-201ENST00000565575 961 ntBASIC16.76■□□□□ 0.27
CLOCKO15516 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.76■□□□□ 0.27
CLOCKO15516 AP005242.2-201ENST00000580065 1175 ntBASIC16.76■□□□□ 0.27
CLOCKO15516 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 AC100803.2-201ENST00000562459 1963 ntBASIC16.76■□□□□ 0.27
CLOCKO15516 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CLOCKO15516 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CLOCKO15516 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLOCKO15516 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.76■□□□□ 0.27
CLOCKO15516 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLOCKO15516 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLOCKO15516 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLOCKO15516 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLOCKO15516 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLOCKO15516 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLOCKO15516 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLOCKO15516 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLOCKO15516 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms