Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.58■□□□□ 0.56
SOX1O00570 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SOX1O00570 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SOX1O00570 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.57■□□□□ 0.56
SOX1O00570 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SOX1O00570 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.57■□□□□ 0.56
SOX1O00570 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.57■□□□□ 0.56
SOX1O00570 RN7SL752P-201ENST00000463779 287 ntBASIC18.57■□□□□ 0.56
SOX1O00570 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.57■□□□□ 0.56
SOX1O00570 ALG1L8P-201ENST00000533887 760 ntBASIC18.57■□□□□ 0.56
SOX1O00570 AC104794.3-201ENST00000566840 1248 ntBASIC18.57■□□□□ 0.56
SOX1O00570 AC003101.2-201ENST00000612557 442 ntBASIC18.57■□□□□ 0.56
SOX1O00570 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SOX1O00570 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.57■□□□□ 0.56
SOX1O00570 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SOX1O00570 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.57■□□□□ 0.56
SOX1O00570 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOX1O00570 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SOX1O00570 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 KRT8P44-201ENST00000441609 1350 ntBASIC18.56■□□□□ 0.56
SOX1O00570 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SOX1O00570 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.56■□□□□ 0.56
SOX1O00570 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
SOX1O00570 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.56■□□□□ 0.56
SOX1O00570 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.56■□□□□ 0.56
SOX1O00570 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.56■□□□□ 0.56
SOX1O00570 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.56■□□□□ 0.56
SOX1O00570 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.56■□□□□ 0.56
SOX1O00570 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.56■□□□□ 0.56
SOX1O00570 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SOX1O00570 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.56■□□□□ 0.56
SOX1O00570 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SOX1O00570 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.56■□□□□ 0.56
SOX1O00570 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX1O00570 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 ELK2AP-201ENST00000392510 1007 ntBASIC18.55■□□□□ 0.56
SOX1O00570 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SOX1O00570 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.55■□□□□ 0.56
SOX1O00570 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SOX1O00570 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SOX1O00570 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.54■□□□□ 0.56
SOX1O00570 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX1O00570 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SOX1O00570 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SOX1O00570 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
SOX1O00570 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
SOX1O00570 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOX1O00570 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SOX1O00570 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.54■□□□□ 0.56
SOX1O00570 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SOX1O00570 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX1O00570 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOX1O00570 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms