Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 LINC02199-201ENST00000506655 2702 ntBASIC12.57□□□□□ -0.4
LINC01549A6NIU2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01549A6NIU2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 AC036111.1-201ENST00000533973 1582 ntBASIC12.56□□□□□ -0.4
LINC01549A6NIU2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 MYC-209ENST00000641252 345 ntBASIC12.56□□□□□ -0.4
LINC01549A6NIU2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC01549A6NIU2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 SLC29A4P1-201ENST00000398760 971 ntBASIC12.55□□□□□ -0.4
LINC01549A6NIU2 NIFKP9-201ENST00000419265 221 ntBASIC12.55□□□□□ -0.4
LINC01549A6NIU2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01549A6NIU2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms