Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 PI4KAP1-204ENST00000612579 1703 ntBASIC18.22■□□□□ 0.51
XIRP2A4UGR9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 AC084346.2-201ENST00000607097 949 ntBASIC18.22■□□□□ 0.51
XIRP2A4UGR9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
XIRP2A4UGR9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AL158211.3-201ENST00000607385 239 ntBASIC18.21■□□□□ 0.51
XIRP2A4UGR9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AC092580.3-201ENST00000430932 139 ntBASIC18.21■□□□□ 0.51
XIRP2A4UGR9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AC010336.2-201ENST00000564226 506 ntBASIC18.21■□□□□ 0.51
XIRP2A4UGR9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 AC005332.7-201ENST00000614046 2005 ntBASIC18.21■□□□□ 0.51
XIRP2A4UGR9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
XIRP2A4UGR9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 KRT18P32-201ENST00000424695 1287 ntBASIC18.21■□□□□ 0.5
XIRP2A4UGR9 RN7SL589P-201ENST00000481268 310 ntBASIC18.21■□□□□ 0.5
XIRP2A4UGR9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.21■□□□□ 0.5
XIRP2A4UGR9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.2■□□□□ 0.5
XIRP2A4UGR9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 MIR6805-201ENST00000615055 62 ntBASIC18.2■□□□□ 0.5
XIRP2A4UGR9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.2■□□□□ 0.5
XIRP2A4UGR9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 SPDYE11-202ENST00000450699 704 ntBASIC18.19■□□□□ 0.5
XIRP2A4UGR9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 SPDYE9P-201ENST00000570642 692 ntBASIC18.19■□□□□ 0.5
XIRP2A4UGR9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
XIRP2A4UGR9 SPDYE10P-202ENST00000612005 668 ntBASIC18.19■□□□□ 0.5
XIRP2A4UGR9 SPDYE8P-202ENST00000612377 668 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms