Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 LINC00167-201ENST00000530583 1419 ntBASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC099336.1-202ENST00000602961 463 ntBASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC138894.3-201ENST00000603787 634 ntBASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC233702.3-201ENST00000578656 1387 ntBASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TCRBV4S1A1TA0A5B7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KRT17P6-201ENST00000453795 1220 ntBASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MINOS1P3-201ENST00000457048 203 ntBASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms