Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 AC011467.2-201ENST00000598425 242 ntBASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 AC097374.2-201ENST00000618617 1306 ntBASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL4A3BPQ9Y5P4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 AC096633.1-201ENST00000422446 749 ntBASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 AC104692.2-201ENST00000603054 253 ntBASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A3BPQ9Y5P4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 INTS4P1-201ENST00000438455 1935 ntBASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 AL121912.1-201ENST00000603683 238 ntBASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A3BPQ9Y5P4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 KRT8P10-201ENST00000450021 1447 ntBASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 AC132008.2-207ENST00000454517 770 ntBASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 AF238378.1-201ENST00000526806 358 ntBASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A3BPQ9Y5P4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A3BPQ9Y5P4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL4A3BPQ9Y5P4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms