Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 AC116407.3-201ENST00000623905 1129 ntBASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB2Q9Y5E7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 MIR574-201ENST00000385209 96 ntBASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 COX5BP2-201ENST00000392354 334 ntBASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 AC025062.2-201ENST00000605477 670 ntBASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 BCL2-203ENST00000589955 5011 ntBASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB2Q9Y5E7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 PMPCAP1-201ENST00000508114 1576 ntBASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 AC067852.2-201ENST00000590513 2313 ntBASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 MTDHP4-201ENST00000600287 670 ntBASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 AD001527.2-201ENST00000622994 785 ntBASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB2Q9Y5E7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 PMS2P1-201ENST00000431037 1228 ntBASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 RPL13AP23-201ENST00000480739 586 ntBASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 OR7E14P-202ENST00000530490 1290 ntBASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB2Q9Y5E7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms